Sains Malaysiana 39(6)(2010):
909–912
Development
and Characterization of Elaeis oleifera Microsatellite Markers
(Pembangunan
dan Pencirian Penanda Mikrosatelit Elaeis oleifera)
Noorhariza Mohd Zaki*1, Ismanizan Ismail2,3, Rozana Rosli2
Ting Ngoot Chin1 & Rajinder Singh1
1Malaysian Palm Oil Board
6, Persiaran Institusi, Bandar Baru Bangi, 43000 Kajang, Selangor,
Malaysia
2Pusat Pengajian Biosains dan Bioteknologi
Fakulti Sains dan Teknologi, Universiti Kebangsaan Malaysia
43600, Bangi, Selangor, Malaysia
3Institut Biologi Sistem (INBIOSIS)
Universiti Kebangsaan Malaysia, 43600, Bangi, Selangor, Malaysia
Diserahkan: 7 Oktober 2009 / Diterima: 11 Januari 2010
ABSTRACT
Ten Elaeis oleifera microsatellite markers were
developed and characterised from 1500 sequences of the E. oleifera genomic
library. The markers were utilised to assess the genetic diversity of E.
oleifera germplasm collections from four South American countries (Colombia,
Costa Rica, Panama and Honduras). The number of alleles per-locus varied from 2
to 11 and the observed and expected heterozygosity ranged from 0.0685 to 0.9853
and 0.1393 to 0.8216 respectively. Majority of the markers showed
transferability to Elaeis guineensis while two markers showed
transferability across Arecaceae taxa. These E. oleifera microsatellite
markers are expected to become useful tools to determine the population
structure and conservation of E. oleifera populations.
Keywords:
E. oleifera; genomic; microsatellite; transferability
ABSTRAK
Sebanyak
sepuluh penanda mikrosatelit genomik Elaeis
oleifera telah dibangunkan dan dicirikan daripada sejumlah 1500 klon di
dalam perpustakaan genomik E. oleifera. Keupayaan penanda yang
dibangunkan ini digunakan bagi menganalisis kepelbagaian genetik di dalam koleksi
germplasma dari empat negara di Amerika Selatan (Colombia, Costa Rica, Panama
dan Honduras). Bilangan alel per-lokus yang dicerap adalah di dalam lingkungan
2 hingga 11 manakala heterozigositi yang dicerap dan dijangka adalah
masing-masing 0.0685 hingga 0.9853 dan 0.1393 hingga 0.8216. Majoriti penanda
mikrosatelit menunjukkan kebolehpindahan kepada Elaeis guineensis manakala
dua penanda berjaya menunjukkan kebolehpindahan merentasi takson famili
Arecaceae. Penanda-penanda mikrosatelit yang berjaya dibangunkan ini di jangka
dapat menjadi penanda dalam menentukan struktur populasi dan pemuliharaan
populasi E. oleifera.
Kata
kunci: E. oleifera; genomik; kebolehpindahan; mikrosatelit
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*Pengarang untuk surat-menyurat; email: hariza@mpob.gov.my
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