Sains Malaysiana 52(4)(2023):
1291-1302
http://doi.org/10.17576/jsm-2023-5204-19
Review of Coronavirus in
Rats: A Potential Zoonotic Threat
(Ulasan Virus Korona pada Tikus: Suatu Potensi Ancaman Zoonosis)
SAULOL HAMID
NUR-FAZILA1,3,*, ABD RAHAMAN YASMIN2,3,
FARZEE FARANIEYZA-AFIQAH1, ABDUL RAHMAN NAWAL-AMANI1, SITI SURI ARSHAD1 & NORFITRIAH MOHAMED SOHAIMI2,3
1Department of Veterinary Pathology and Microbiology, Faculty of Veterinary Medicine, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor Darul Ehsan, Malaysia
2Department of Veterinary Laboratory Diagnostics, Faculty of Veterinary
Medicine, Universiti Putra Malaysia, 43400 UPM Serdang, Selangor Darul Ehsan,
Malaysia
3Laboratory of Vaccines and Biomolecules,
Institute of Bioscience, Universiti Putra Malaysia,
43400 UPM Serdang, Selangor Darul Ehsan, Malaysia
Diserahkan:
20 September 2022/Diterima: 21 Mac 2023
Abstract
The current
COVID-19 pandemic has highlighted the importance of the Coronaviridae family as a threat
to public health in the emergence of a deadly zoonotic disease. Rats are the
possible primary host of the infection as they are highly populated in urban
areas, creating a significant epidemic risk. The tendency of coronaviruses (CoVs) to overcome species barriers and adapt to hosts
typically found close to humans emphasised the need for further study on
coronavirus infection. Sialodacryoadenitis virus
(SDAV) and Parker’s rat coronavirus (PRC) are the most commonly isolated
pathogens for coronavirus infections in the laboratory and wild rats. They are
contagious and could be transmitted to susceptible rats by direct contact,
fomites, or aerosol. Coronavirus genera include Alphacoronavirus and Betacoronavirus, which are restricted to
bats and other mammalian hosts, while the Gammacoronavirus and Deltacoronavirus are restricted to birds.
All known rat coronaviruses are members of the beta genus. Betacoronavirus are divided into five subgenera, i.e., Embecovirus, Hibecovirus, Merbecovirus, Nobecovirus, and Sarbecovirus.
All rat coronaviruses are categorised as the Embecovirus subgenus. Most studies have proven that rat coronaviruses are responsible for
hepatitis, enteritis, reproductive problems, and respiratory and salivary gland
infections, including episcleritis, and
dacryoadenitis. The scant literature data, mostly comprising publications from
the last century, does not adequately explain the etiopathology of SDAV and PRC infections. This review provides an overview of the knowledge
on the characteristics, transmission, clinical signs, pathology, and diagnosis
of rat coronaviruses, besides better understanding their zoonotic potentials.
Keywords: Coronavirus; Parker’s rat coronavirus; rats; sialodacryoadenitis virus; zoonosis
Abstrak
Pandemik COVID-19 semasa telah menekankan kepentingan famili Coronaviridae sebagai ancaman kepada kesihatan awam dalam kemunculan penyakit zoonosis yang boleh membawa maut. Tikus adalah hos utama jangkitan yang mungkin kerana mereka mempunyai populasi yang tinggi di kawasan bandar, mewujudkan risiko wabak yang ketara. Kecenderungan koronavirus untuk mengatasi halangan spesies dan menyesuaikan diri dengan perumah yang biasanya ditemui berdekatan dengan manusia menekankan keperluan untuk kajian lanjut mengenai jangkitan koronavirus. Virus sialodacryoadenitis (SDAV) dan koronavirus tikus Parker (PRC) adalah patogen yang paling biasa dipencilkan bagi jangkitan koronavirus pada tikus makmal dan liar. Mereka berjangkit dan boleh menjangkiti tikus yang mudah terdedah melalui sentuhan langsung, fomit atau aerosol. Genus koronavirus termasuklah Alphacoronavirus dan Betacoronavirus adalah terhad kepada kelawar dan perumah mamalia lain, manakala Gammacoronavirus dan Deltacoronavirus adalah terhad kepada burung. Semua koronavirus tikus yang diketahui adalah ahli genus beta. Betacoronavirus dibahagikan kepada lima
subgenus, iaitu, Embecovirus, Hibecovirus, Merbecovirus, Nobecovirusdan Sarbecovirus. Semua koronavirus tikus dikategorikan sebagai subgenus Embecovirus. Kebanyakan kajian telah membuktikan bahawa koronavirus tikus bertanggungjawab untuk radang hati, radang usus, masalah pembiakan, jangkitan saluran pernafasan dan jangkitan kelenjar air liur, termasuklah episkleritis dan dacryoadenitis.
Data kepustakaan yang sedikit,
yang kebanyakannya terdiri daripada penerbitan dari abad yang lalu, tidak menjelaskan dengan secukupnya etiopatologi jangkitan SDAV dan PRC. Kajian ini memberikan gambaran pengetahuan secara keseluruhan tentang ciri, penularan, tanda klinikal, patologi dan diagnosis koronavirus tikus, selain memberi pemahaman lebih baik tentang potensi zoonosis mereka.
Kata kunci: Koronavirus; koronavirus tikus Parker; tikus; virus sialodacryoadenitis; zoonosis
RUJUKAN
Annisa,
C. 2020. Coronaviruses in rat and bat meat supply chains. Nature Food 1(9): 528.
Bartak,
M., Słońska, A., Bańbura,
M.W. & Cymerys, J. 2021. SDAV, the rat coronavirus-How much do we know about it in the light of
potential zoonoses. Viruses 13(10): 1995.
Barthold,
S.W., Griffey, S.M. & Percy, D.H. 2016. Pathology
of Laboratory Rodents and Rabbits. 4th ed. Wiley-Blackwell.
Besselsen,
D.G., Wagner, A.M. & Loganbill, J.K. 2002.
Detection of rodent coronaviruses by use of fluorogenic reverse transcriptase-polymerase chain reaction analysis. Comparative Medicine 52(2): 111-116.
Bhatt, P.N., Percy, D.H. &
Jonas, A.M. 1972. Characterization of the virus of Sialodacryoadenitis of rats: A member of the coronavirus group. Journal
of Infectious Diseases 126(2): 123-130.
Bukhari, K., Mulley, G., Gulyaeva, A.A., Zhao, L., Shu, G., Jiang, J. & Neuman, B.W. 2018. Description and initial characterization
of metatranscriptomic nidovirus-like
genomes from the proposed new family Abyssoviridae,
and from a sister group to the Coronavirinae, the
proposed genus Alphaletovirus. Virology 524: 160-171.
Cui, J., Li, F. & Shi,
Z.L. 2018. Origin and evolution of pathogenic coronaviruses. Nature Reviews
Microbiology 17(3): 181-192.
Decaro,
N. & Lorusso, A. 2020. Novel human coronavirus
(SARS-CoV-2): A lesson from animal coronaviruses. Veterinary Microbiology 244: 108693.
Dhama, K., Patel, S.K., Sharun, K., Pathak, M., Tiwari, R., Yatoo,
M.I., Malik, Y.S., Sah, R., Rabaan,
A.A., Panwar, P.K., Singh, K.P., Michalak,
I., Chaicumpa, W., Martinez-Pulgarin,
D.F., Bonilla-Aldana, D.K. & Rodriguez-Morales, A.J. 2020. SARS-CoV-2 jumping the
species barrier: Zoonotic lessons from SARS, MERS and recent advances to combat
this pandemic virus. Travel Medicine
and Infectious Disease 37: 101830.
Fouchier,
R.A.M., Hartwig, N.G., Bestebroer,
T.M., Niemeyer, B., de Jong, J.C., Simon, J.H. & Osterhaus, A.D.M.E. 2004.
A previously undescribed coronavirus associated with respiratory disease in
humans. Proceedings of the National
Academy of Sciences 101(16): 6212-6216.
Gorbalenya,
A.E., Enjuanes, L., Ziebuhr,
J. & Snijder, E.J. 2006. Nidovirales:
Evolving the largest RNA virus genome. Virus
Research 117(1): 17-37.
Han, B.A., Schmidt, J.P.,
Bowden, S.E. & Drake, J.M. 2015. Rodent reservoirs of future zoonotic diseases. Proceedings of the National Academy of
Sciences 112(22): 7039-7044.
Hogue, B.G. & Machamer, C.E. 2007.
Coronavirus structural proteins and virus assembly. In Nidoviruses, edited by Perlman, S., Gallagher, T. & Snijder,
E.J. Wiley Online Library. pp. 179-200.
Huong,
N.Q., Nga, N.T.T., Long, N.V., Luu,
B.D., Latinne, A., Pruvot,
M., Phuong, N.T., Quang, L.T.V., Hung, V.V., Lan,
N.T., Hoa, N.T., Minh, P.Q., Diep, N.T., Tung, N., Ky, V.D., Roberton, S.I., Thuy, H.B., Long, N.V., Gilbert, M., Wicker, L., Mazet, J.A.K., Johnson, C.K., Goldstein, T., Tremeau-Bravard, A., Ontiveros, V., Joly, D.O., Walzer, C., Fine, A.E. & Olson, S.H. 2020. Coronavirus
testing indicates transmission risk increases along wildlife supply chains for
human consumption in Viet Nam, 2013-2014. PLoS ONE 15(8): e0237129.
Jonas, A.M., Craft, J., Black,
L., Bhatt, P.N. & Hilding, D. 1969. Sialodacryoadenitis in the rat. A light and electron
microscopic study. Archives of Pathology 88: 613-622.
King, A.M.Q., Lefkowitz, E., Adams, M.J. & Carstens,
E.B. 2011. Virus Taxonomy: Ninth Report
of the International Committee on Taxonomy of Viruses. 1st ed. Elsevier.
Ksiazek,
T.G., Erdman, D., Goldsmith, C.S., Zaki, S.R., Peret, T., Emery, S., Tong, S., Urbani,
C., Comer, J.A., Lim, W., Rollin, P.E., Dowell, S.F., Ling, A.E., Humphrey,
C.D., Shieh, W.J., Guarner, J., Paddock, C.D., Roca,
P., Fields, B., DeRisi, J., Yang, J.Y., Cox, N.,
Hughes, J.M., LeDuc, J.W., Bellini, W.J. &
Anderson, L.J. 2003. A novel coronavirus associated with severe acute respiratory
syndrome. The New England Journal of
Medicine 348(20): 1953-1966.
Lau, S.K.P., Woo, P.C.Y., Li,
K.S.M., Tsang, A.K.L., Fan, R.Y.Y., Luk, H.K.H., Cai, J.P., Chan, K.H., Zheng, B.J., Wang, M. & Yuen,
K.Y. 2014. Discovery of a novel coronavirus, China Rattus coronavirus HKU24, from Norway rats supports the murine origin of Betacoronavirus 1 and has implications for the ancestor of Betacoronavirus Lineage A. Journal of Virology 89(6): 3076-3092.
Lvov, D.K., Alkhovsky, S.V., Kolobukhina,
L.V. & Burtseva, E.I. 2020. Etiology of epidemic outbreaks COVID-19 in Wuhan, Hubei province, Chinese People
Republic associated with 2019-nCoV (Nidovirales, Coronaviridae, Coronavirinae, Betacoronavirus, Subgenus Sarbecovirus):
Lessons of SARS-CoV outbreak. Problems of Virology, Russian Journal 65(1): 6-15.
Maclachlan,
N., Dubovi, E. & Fenner,
F. 2016. Fenner's Veterinary Virology: Coronaviridae. 5th ed. Elsevier.
Mahy,
B.W.J. 2008. The Dictionary of Virology. 4th ed. Massachusetts: Academic Press.
Malik, A.Y. 2020. Properties
of coronavirus and SARS-CoV-2. Malaysian
Journal of Pathology 42(1): 3-11.
Meerburg,
B., Singleton, G.R. & Kijlstra, A. 2009.
Rodent-borne diseases and their risks for public health. Critical Reviews in Microbiology 35(3): 221-270.
Mohd-Qawiem,
F., Nur-Fazila, S.H., Ain-Fatin,
R., Yong, Q.H., Nur-Mahiza, I. & Yasmin, A. R.
2022a. Detection of zoonotic-borne parasites in Rattus spp. in Klang Valley, Malaysia. Veterinary
World 15(4): 1006-1014.
Mohd-Qawiem,
F., Nawal-Amani, A.R., Faranieyza-Afiqah,
F., Yasmin, A.R., Arshad, S.S., Norfitriah, M.S.
& Nur-Fazila, S.H. 2022b.
Paramyxoviruses in rodents: A review. Open
Veterinary Journal 12(6): 868-876.
Narayanan,
K., Chen, C.J., Maeda, J. & Makino, S. 2003. Nucleocapsid-independent specific viral RNA packaging via
viral envelope protein and viral RNA signal. Journal of Virology 77(5): 2922-2927.
Neuman, B.W., Kiss, G., Kunding,
A.H., Bhella, D., Baksh,
M.F., Connelly, S., Droese, B., Klaus, J.P., Makino,
S., Sawicki, S.G., Siddell,
S.G. & Buchmeier, M.J. 2011. A structural analysis of M protein in
coronavirus assembly and morphology. Journal
of Structural Biology 174(1): 11-22.
Parker, J.C., Cross, S.S.
& Rowe, W.P. 1970. Rat coronavirus (RCV): A prevalent, naturally occurring pneumotropic virus of rats. Archiv. Gesamte Virusforschung 31(3-4): 293-302.
Quesenberry,
K. & Carpenter, J.W. 2011. Ferrets,
Rabbits, and Rodents. 3rd ed. Philadelphia: Saunders.
Raamsman, M.J., Locker, J.K., De Hooge, A., De Vries, A.A.,
Griffiths, G., Vennema, H. & Rottier, P.J. 2000.
Characterization of the coronavirus mouse hepatitis virus strain A59 small
membrane protein E. Journal of
Virology 74(5): 2333-2342.
Sato, T., Meguid,
M.M., Quinn, R.H., Zhang, L. & Chen, C. 2001. Feeding behavior during sialodacryoadenitis viral infection in rats. Physiology and Behavior 72(5): 721-726.
Sun, W., Liao, J.P., Yu, K.Y., Qiu, J.X., Que, C.L., Wang, G.F. & Ma, J. 2021. A
severe case of human coronavirus 229E pneumonia in an elderly man with diabetes
mellitus: A case report. BMC Infectious
Diseases 21(1): 524.
Suu-Ire, R., Obodai, E., Bel-Nono, S.O., Ampofo, W.K., Mazet, J.A.K.,
Goldstein, T., Johnson, C.K., Smith, B., Boaatema,
L., Asigbee, T.W., Awuni,
J., Opoku, E. & Kelly, T.R. 2022. Surveillance
for potentially zoonotic viruses in rodent and bat populations and behavioral risk in an agricultural settlement in Ghana. One Health Outlook 4: 6.
V’kovski, P., Kratzel,
A., Steiner, S., Stalder, H. & Thiel, V. 2021. Coronavirus
biology and replication: implications for SARS-CoV-2. Nature Reviews Microbiology 19(3): 155-170.
Van der Hoek, L., Pyrc, K., Jebbink, M.F., Vermeulen-Oost, W., Berkhout,
R.J.M., Wolthers, K.C., Wertheim-van Dillen, P.M.E., Kaandorp, J., Spaargaren, J. & Berkhout, B.
2004. Identification of a new human coronavirus. Nature Medicine 10(4): 368-373.
Walker, P.J., Siddell, S.G., Lefkowitz, E.J., Mushegian, A.R., Adriaenssens,
E.M., Dempsey, D.M., Dutilh, B.E., Harrach, B., Harrison, R.L., Hendrickson, R.C., Junglen, S., Knowles, N.J., Kropinski,
A.M., Krupovic, M., Kuhn, J.H., Nibert,
M., Orton, R.J., Rubino, L., Sabanadzovic,
S. & Davison, A.J. 2020. Changes to virus taxonomy and the Statutes
ratified by the International Committee on Taxonomy of Viruses. Archives of Virology 165(11): 2737-2748.
Walsh, E.E., Shin, J.H. & Falsey, A.R. 2013. Clinical impact of human coronaviruses
229E and OC43 infection in diverse adult populations. Journal of Infectious Diseases 208(10): 1634-1642.
Wang, W., Lin, X.D., Guo, W.P., Zhou, R.H., Wang, M.R., Wang, C.Q., Ge, S., Mei,
S.H., Li, M.H., Shi, M., Holmes, E.C. & Zhang, Y.Z. 2015. Discovery,
diversity and evolution of novel coronaviruses sampled from rodents in China. Virology 474: 19-27.
Wang, Y.,
Grunewald, M. & Perlman, S. 2020. Coronaviruses:
An updated overview of their replication and pathogenesis. Methods in Molecular Biology 2203: 1-29.
Wartecki,
A. & Rzymski, P. 2020. On the coronaviruses and
their associations with the aquatic environment and wastewater. Water 12(6): 1598.
World Health Organization
(WHO). 2021. WHO Coronavirus (COVID-19) Dashboard with vaccination data. https://Covid19.Who.Int/ Accessed on 8 June 2022.
Wilson, L., Mckinlay, C., Gage, P. & Ewart, G. 2004. SARS
coronavirus E protein forms cation-selective ion channels. Virology 330(1): 322-331.
Woo, P.C.Y., Lau, S.K.P., Chu,
C.M., Chan, K.H., Tsoi, H.W., Huang, Y., Wong,
B.H.L., Poon, R.W.S., Cai, J.J., Luk,
W.K., Poon, L.L.M., Wong, S.S.Y., Guan, Y., Peiris,
J.S.M. & Yuen, K.Y. 2005. Characterization and complete genome sequence of
a novel coronavirus, coronavirus HKU1, from patients with pneumonia. Journal of Virology 79(2): 884-895.
Wu, F., Zhao, S., Yu, B.,
Chen, Y.M., Wang, W., Song, Z.G., Hu, Y., Tao, Z.W., Tian, J.H., Pei, Y.Y.,
Yuan, M.L., Zhang, Y.L., Dai, F.H., Liu, Y., Wang, Q.M., Zheng, J.J., Xu, L.,
Holmes, E.C. & Zhang, Y.Z. 2020. A new coronavirus associated with human
respiratory disease in China. Nature 579(7798): 265-269.
Yoo, D., Pei, Y., Christie, N. & Cooper, M. 2000. Primary structure of the sialodacryoadenitis virus genome: Sequence of the
structural-protein region and its application for differential diagnosis. Clinical Diagnostic Laboratory Immunology 7(4):
568-573.
Zaki,
A.M., Van Boheemen, S., Bestebroer,
T.M., Osterhaus, A.D. & Fouchier, R.A. 2012.
Isolation of a novel coronavirus from a man with pneumonia in Saudi Arabia. New England Journal of Medicine 367(19):
1814-1820.
Zappulli,
V. 2020. Pathology of coronavirus infections: A review of lesions in animals in
the one-health perspective. Animals
(Basel) 10(12): 2377.
Zhou, P., Yang, X.L., Wang,
X.G., Hu, B., Zhang, L., Zhang, W., Si, H.R., Zhu, Y., Li, B., Huang, C.L.,
Chen, H.D., Chen, J., Luo, Y., Guo, H., Jiang, R.D.,
Liu, M.Q., Chen, Y., Shen, X.R., Wang, X., Zheng, X.S., Zhao, K., Chen, Q.J.,
Deng, F., Liu, L.L., Yan, B., Zhan, F.X., Wang, Y.Y., Xiao, G.F. & Shi,
Z.L. 2020. A pneumonia outbreak associated with a new coronavirus of probable
bat origin. Nature 579(7798):
270-273.
Zhou, Z., Qiu,
Y. & Ge, X. 2021. The taxonomy, host range and pathogenicity of coronaviruses
and other viruses in the Nidovirales order. Animal Diseases 1(1): 5.
*Pengarang untuk surat-menyurat; email:
nurfazila@upm.edu.my
|